MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Lactobacillus murinus LAC.1

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from a total of 52 genomes

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PROKKA Genome Annotation:

contigs: 225

bases: 2,084,440 bps

CDS: 1,985

rRNA: 10

Repeat region:

tmRNA: 1

tRNA: 63

misc RNA:

Total features: 2,059

Total number of protein coding genes annotated/found: 1,985

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Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range	Gene Product Name
SEQF5005\|JADGKI010000141.1	SEQF5005_00078	NA AA	264/88	104-367	hypothetical protein
SEQF5005\|JADGKI010000019.1	SEQF5005_00027	NA AA	651/217	108-758	IS30 family transposase IS1062
SEQF5005\|JADGKI010000060.1	SEQF5005_01093	NA AA	2415/805	108-2522	hypothetical protein
SEQF5005\|JADGKI010000017.1	SEQF5005_01811	NA AA	171/57	115-285	hypothetical protein
SEQF5005\|JADGKI010000050.1	SEQF5005_01920	NA AA	171/57	115-285	hypothetical protein
SEQF5005\|JADGKI010000090.1	SEQF5005_00022	NA AA	741/247	122-862	hypothetical protein
SEQF5005\|JADGKI010000162.1	SEQF5005_02010	NA AA	624/208	122-745	hypothetical protein
SEQF5005\|JADGKI010000131.1	SEQF5005_01501	NA AA	129/43	131-259	hypothetical protein
SEQF5005\|JADGKI010000087.1	SEQF5005_01297	NA AA	558/186	133-690	hypothetical protein
SEQF5005\|JADGKI010000037.1	SEQF5005_01515	NA AA	738/246	133-870	hypothetical protein
SEQF5005\|JADGKI010000035.1	SEQF5005_01527	NA AA	390/130	136-525	hypothetical protein
SEQF5005\|JADGKI010000033.1	SEQF5005_00807	NA AA	261/87	139-399	hypothetical protein
SEQF5005\|JADGKI010000010.1	SEQF5005_01913	NA AA	939/313	143-1081	Choloylglycine hydrolase
SEQF5005\|JADGKI010000121.1	SEQF5005_01887	NA AA	426/142	144-569	IS30 family transposase IS1062
SEQF5005\|JADGKI010000024.1	SEQF5005_01898	NA AA	426/142	144-569	IS30 family transposase IS1062
SEQF5005\|JADGKI010000012.1	SEQF5005_01907	NA AA	426/142	144-569	IS30 family transposase IS1062
SEQF5005\|JADGKI010000130.1	SEQF5005_01074	NA AA	474/158	145-618	hypothetical protein
SEQF5005\|JADGKI010000132.1	SEQF5005_01709	NA AA	222/74	150-371	Putative transposase InsK for insertion sequence element IS150
SEQF5005\|JADGKI010000032.1	SEQF5005_01549	NA AA	1323/441	156-1478	Amino-acid permease RocC
SEQF5005\|JADGKI010000165.1	SEQF5005_01894	NA AA	900/300	160-1059	HTH-type transcriptional regulator HdfR

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Page last updated: July 7, 2021 08:39:35